train_tools.measures ==================== .. py:module:: train_tools.measures .. autoapi-nested-parse:: Adapted from the following references: [1] https://github.com/JunMa11/NeurIPS-CellSeg/blob/main/baseline/compute_metric.py [2] https://github.com/stardist/stardist/blob/master/stardist/matching.py Module Contents --------------- .. py:function:: evaluate_f1_score_cellseg(masks_true, masks_pred, threshold=0.5) Get confusion elements for cell segmentation results. Boundary pixels are not considered during evaluation. .. py:function:: evaluate_f1_score(tp, fp, fn) Evaluate F1-score for the given confusion elements