Tutorial

Explore the spaCR pipeline step-by-step through interactive tutorials.
Each section includes both GUI and Notebook workflows.

Masking
1. Generate segmentation masks
GUI Notebook
Measurement
2. Measure & crop single cells
GUI Notebook
Classify
3. Classify using ML/DL
GUI Notebook
Barcodes
4. Map barcodes from FASTQ
GUI Notebook
Regression
5. Perform regression analysis
GUI Notebook