core.Baseline.utils¶

Adapted from the following references: [1] https://github.com/JunMa11/NeurIPS-CellSeg/blob/main/baseline/model_training_3class.py

Module Contents¶

core.Baseline.utils.identify_instances_from_classmap(class_map, cell_class=1, threshold=0.5, from_logits=True)[source]¶: Identification of cell instances from the class map

core.Baseline.utils.create_interior_onehot(inst_maps)[source]¶

interior(H,W), np.uint8: three-class map, values: 0,1,2 0: background 1: interior 2: boundary